Full set of Academic Research References
Many academic research project, papers and publication have used and cited Panasas PanFS. Following is a list of some of those projects.
Many academic research project, papers and publication have used and cited Panasas PanFS. Following is a list of some of those projects.
Bethke, I.; Bentsen, Ml; Veldore, V. (2013, Jan.). Earth System Model Installation at TERI HPC: Norway – India Collaboration. The Energy and Resources Institute TERIA-NFA Working Paper No. 7.
Furlani, T.; Schneider, B.; Jones, M.; Towns, J.; Hard, D.; Patra, A.; DeLeon, R.; Gallo, S.; Lu, C-D.; Ghadersohi, A.; Gentner, R.; Bruno, A.; Boisseau, J.; Wang, F.; von Laszewski, G. (2012, Nov.). Data Analytics Driven Cyberinfrastructure Operations, Planning and Analysis Using XDMoD. Proceedings of the SC12 Conference.
Patil, S.; Ren, K.; Gibson, G. (2012, Nov. 10). A Case for Scaling HPC Metadata Performance through De-specialization. 2012 SC Companion: High Performance Computing, Networking Storage and Analysis. doi: 10.1109/SC.Companion.2012.372
Mitchell, C.; Nunez, J; Wang, J. (2009, Aug 31) Overlapped checkpointing with hardware assist. 2009 IEEE International Conference on Cluster Computing and Workshops. doi: 10.1109/CLUSTR.2009.5289154
Kawalia, A.; Motameny, S.; Wonczak, S.; Thiele, H.; Nieroda, L.; Jabbari, K.; Borowski, S.; Sinha, V.; Gunia, W.; Lang, U.; Achter, V.; and Nuernberg, P. (2015, May 5). Leveraging the Power of High Performance Computing for Next Generation Sequencing Data Analysis: Tricks and Twists from a High Throughput Exome Workflow. PLoS One. 105; 10(5): e0126321. doi: 10.1371/journal.pone.0126321
Moulitsas, I.; Sharma, A. (2017, Sep.). MPI to Coarray Fortran: Experiences with a CFD Solver for Unstructured Meshes. Scientific Programming Journal, 2017. doi: 10.1155/2017/3409647
Tang, A.; Gulbeden, A.; Zhou, J.; Stratherarn, W.; Yang, T; Chu, L. (2004, Nov). The Panasas ActiveScale Storage Cluster – Delivering Scalable High Bandwidth Storage. SC’04: Proceedings of the 2004 ACM/IEEE Conference on Supercomputing. doi: 10.1109/SC.2004.57
Shrum, D.C.; Woodruff, B.W.; Stagg, S.M. (2012, Jul 25). Creating an Infrastructure for High-Throughput High-Resolution Cryogenic Electron Microscopy.Journal of Structural Biology. 2012 Oct: 180(1): 254-258. doi: 10.1016/j.jsb.2012.07.009
Lofstead, G. (2010, Dec. 14). Extreme Scale Data Management in High Performance Computing. Georgia Tech University Library SMARTech.
Zheng, F.; Abbasi, H.; Docan, C.; Lofstead, J.; Liu, Q.; Klasky, S.; Parashar, M. (2010, Jan 25). PreDatA – Preparatory Data Analytics on Peta-Scale Machines. 2010 IEEE International Symposium on Parallel & Distributed Processing (IPDPS). doi: 10.1109/IPDPS.2010.5470454
Nagle, D.; Factor, M.E.; Iren, S.; Naor, D.; Riedel, E.; Rodeh, O.; Satran, J. (2008, Jul). The ANSI T10 object-based storage standard and current implementations. IBM Journal of Research and Development, Volume: 52 Issue: 4.5. doi: 10.1147/rd.524.0401
Hermann, M.; Clunie, D.; Fedorov, A.; Doyle, S.; Pieper, S.; Klepeis, V.; Le, L.; Mutter, G.; Milstone,; Schultz, T.; Kikinis, R.; Kotecha, G.; Hwang, D.; Andriole, K.; Iafrate, A.; Brink, J.; Boland, G.; Dreyer, K.; Michalski, M.; Golden, J.; Louis, D.; Lennerz, J. (2018, Nov 2). Implementing the DICOM Standard for Digital Pathology. Journal of Pathology Informatics. 2018: 9: 37. doi: 10.4103/jpi.jpi_42_18
Chan, J.; Ding, Q.; Lee, P.; Chan, H. (2014, Feb). Parity Logging with Reserved Space: Towards Efficient Updates and Recovery in Erasure-coded Clustered Storage. FAST’14 Proceedings of the 12th USENIX Conference on File and Storage Technologies.
Lysaght, M.; Wilson, N.; McHugh, E.; Browne, M.; Civario, G. (2013, Feb). Best Practice mini-guide “Stokes”. Partnership For Advanced Computing in Europe (PRACE).
Swanson, D. (2018, Aug 29). Finding Subatomic Particles and Nanoscopic Gold with Open, Shared Computing. University of Kansas Journals
Ching, A.; Coloma, K.; Li, J.; Choudhary, A.; Liao, W-K. (2005, Jan). High-Performance Techniques for Parallel I/O. Proceedings of the 2005 International Symposium on High-Performance Computer Architecture.
Coloma, K.; Choudhary, A.; Liao, W-K.; Ward, L.; Tideman, S. (2005, Jan). DAChe: Direct Access Cache System for Parallel I/O. Proceedings of the 2005 International Symposium on High-Performance Computer Architecture.
Liao, W-K.; Coloma, K.; Choudhary, A.; Ward, L. (2001, Jan) Cooperative Client-side File Caching for MPI Applications. Proceedings HPCA Seventh International Symposium on High-Performance Computer Architecture.
Ching, A.; Liao, W-K.; Choudhary, A.; Ross, R.; Ward, L. (2007, Nov 10.) Noncontiguous Locking Techniques for Parallel File Systems. SC ’07: Proceedings of the 2007 ACM/IEEE Conference on Supercomputing. doi: 10.1145/1362622.1362658
Tovar, B.; Lyons, B.; Mohrman, K.; Sly-Delgado, B.; Lannon, K.; Thain, D. (2022, Feb). Dynamic Task Shaping for High Throughput Data Analysis Applications in High Energy Physics. Proceedings International Symposium on Parallel and Distributed Processing (IPDPS) 2022.
Grossman, M.; Araya-Polo, M. (2015, Oct. 30). Efficient Static and Dynamic Memory Management Techniques for Multi-GPU Systems. Runtime Systems for Extreme Scale Programming Models and Architectures (RESPA ’15).
Grossman, M.; Araya-Polo, M. (2015, Nov). Distributed, Heterogeneous Scheduling Techniques Motivated by Production Geophysical Applications. 8thWorkshop on Many-Task Computing on Clouds, Grids, and Supercomputers (MTAGS) 2015.
Moll, M.; Bryant, D.H.; Kavraki, L.E. (2010, Nov 11). The LabelHash algorithm for substructure matching. BMC Bioinformatics. 2010; 11: 555. doi: 10.1186/1471-2105-11-555
Jia, Z., Treichler, S., Shipman, G., McCormick, P., Aiken, A. (2018, May 2). Isometry: A Path-Based Distributed Data Transfer System. ICS’18, June 12-15, 2018, Beijing, China. doi: 10.1145/3205289.3205301
Farhat, C. (2009, Aug 21). Parameterized Aeroelastic Reduced-Order Modeling of Fighters. Defense Technical Information Center. Accession Number: AD1026527
Gomez, L.B.; Nukada, A.; Maruyama, N.; Cappello, F.; Matsuoka, S. (2010, Dec 16). Low-overhead checkpoint for large-scale GPU-accelerated systems. IPSJ SIG Technical Report. Vol.2010-ARC-102 No.12.
Calleja, P.; Posey, S.; Loewe, B. (2009, May). Cluster Scalability of Implicit and Implicit-Explicit LS-DYNA Simulations Using a Parallel File System. 7thEuropean LS-DYNA Conference.
Langdon, W.B. (2012, Jun 12). Initial experiences of the Emerald: e-Infrastructure South GPU supercomputer. UCL Department of Computer Science Research Note RN/12/08.
Lampa, S.; Dahloe, M.; Olason, P.I.; Hagberg, J.; Spjuth, O. (2013, Jun 25). Lessons Learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data. Gigascience. 2013 Jun 25;2(1):9. doi: 10.1186/2047-217X-2-9
Horne, K. (2009, Dec). Parallelization of Performance Limiting Routines in the Computational Fluid Dynamics General Notation System Library. Utah State University Digital Commons.
Pomeran, M.; Zlagnean, L.; Besutiu, L. (2019, Sep). Tentative oblique subduction high resolution models, lead to reducing costs of HPCC usage. Conference Proceedings, 10th Congress of the Balkan Geophysical Society, Sep 2019, Volume 2019, p.1 – 5 doi: 10.3997/2214-4609.201902620